Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015858439.1_cds_XP_016513902.1_26400
CDS Infomation

[gene=LOC107830773] [db_xref=GeneID:107830773] [protein=laccase-4-like] [protein_id=XP_016513902.1] [location=join(19039..19062,19155..19306,19802..20046,20271..20399,21051..22010,22494..22624)] [gbkey=CDS]
Sequence

ATGACCAGACAATACAAGTTTAATATTCAAATGAAAAATGTTACAAGATTGTGTCAAACA
AAGAGTATTGTGACAGTCAATGGCCAGTTACCAGGACCTACAATCACTACTAGGGAAGGA
GACAGACTTCTCATCAAAGTTGTTAATCATGTTCAGTACAATATCTCTATTCACTGGCAT
GGAGTGAGACAACTAAGAAGCGCATGGGCAGATGGACCAGCTTATATTACACAATGCCCT
ATCCAAACGGGCCAAAACTATGTATACAATTTCACTATTACTGGGCAAAGGGGAACATTG
TTTTGGCATGCTCACATCTCATGGCTGAGAGTTACAGTCTATGGAGCTATTGTTATCCTT
CCCAAGAAAGGCGTCGCTTATCCTTTTCCTCAACCCTTTAAAGAAGTTCCTATCATTTTT
GGTGAATGGTGGAATGACGATACAGAAACAAATATCAATCAAGCCCTCCAAACTGGTGGA
GCTCCAAATATTTCGGATGCTCATACTATCAACGGTCTTCCTGGACTTTTCTACAATTGC
TCCACTAAAAATACATTCAGATTGAAAGTGAAACCTGGGAAAACATATCTATTGAGATTA
ATCAATGCTGCACTCGATGATGAGCTATTCTTCAGTATAGCTAACCACACCCTTACTGTT
GTAGAAGTTGATGCAGTTTATATAAAACCATTTAAGACAAATATAATTTTAATAACTCCA
GGACAAACTACAAATCTCCTACTAAAAACCATGACTCACCACCCTAACGCCACCTTTCTC
ATGGCGGCGCGGCCTTACTCCTCCGGTCCCGCCGCCTTCGACAATACAACAACCACCGCA
ATCTTGGAATATGAAAATCAACCCTCCACCAAAAAAAGTAACAAATTTCCTGTATTAAGA
CCTACACTCCCTATTTTCAATGACACAAATTTTGTTACAAATTTTAGCAAGAAAATCAAA
AGTCTAGCAAATGCAAAATTCCCAGCTAATGTTCCAAAAAATATTGATAGTCGATTTTTT
TTCACTGTTGGACTAGGATTACATCCATGTCCTCAGAACCAAACATGTCAAGGACCAAAT
AATACGAAATTTGCAGCATCTATTAATAATGTCTCCTTTGTTCAGCCAAATATAGCATTA
CTTCAAGCTCACTTTTTCAACCAATCAAATGGTGTTTATACTACTGATTTTCCAGCCAAC
CCAACATTCAAATTTAATTACACAGGCAACCCACCAACCAATATATTTGTGACAAGTGGC
ACAAAAGTTGTAGTGCTTTCTTATAATACTAGAGTGGAGTTGGTTTTACAAGACACTAGT
ATTCTTGGTGCTGAAAGTCACCCTCTTCATCTTCATGGGTTCAATTTCTTTGTTGTTGGT
CAAGGATTTGGAAATTACAATCCTAGTCAAGATCCTGTTAATTTCAACCTCGTTGACCCT
GCTGAAAGGAACACTGTTGGTGTGCCAGCTGGTGGCTGGGTCGCCATTCGCTTCCTTGCC
GACAATCCAGGAGTGTGGTTTATGCATTGTCACCTTGAAGTTCACACAAGCTGGGGATTG
AAAATGGCTTGGATTGTAATGGATGGAAAAGGCCGCAAACAGAAGCTTCCTCCTCCACCT
GCTGATCTTCCTAAGTGTTAA

Peptide Sequence

PEP ID

XP_016513902.1
PEP Infomation

PREDICTED: laccase-4-like [Nicotiana tabacum]
Sequence

MTRQYKFNIQMKNVTRLCQTKSIVTVNGQLPGPTITTREGDRLLIKVVNHVQYNISIHWH
GVRQLRSAWADGPAYITQCPIQTGQNYVYNFTITGQRGTLFWHAHISWLRVTVYGAIVIL
PKKGVAYPFPQPFKEVPIIFGEWWNDDTETNINQALQTGGAPNISDAHTINGLPGLFYNC
STKNTFRLKVKPGKTYLLRLINAALDDELFFSIANHTLTVVEVDAVYIKPFKTNIILITP
GQTTNLLLKTMTHHPNATFLMAARPYSSGPAAFDNTTTTAILEYENQPSTKKSNKFPVLR
PTLPIFNDTNFVTNFSKKIKSLANAKFPANVPKNIDSRFFFTVGLGLHPCPQNQTCQGPN
NTKFAASINNVSFVQPNIALLQAHFFNQSNGVYTTDFPANPTFKFNYTGNPPTNIFVTSG
TKVVVLSYNTRVELVLQDTSILGAESHPLHLHGFNFFVVGQGFGNYNPSQDPVNFNLVDP
AERNTVGVPAGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVMDGKGRKQKLPPPP
ADLPKC

Transcript Sequence

Gene sequence data has not been registered.